Shortlist
Apple Console 10.8 (414) (discussion).
Apple Disk Utility 13 (430) (discussion).
Apple diskutil (version unidentifiable) in OS X 10.8.2.
Apple Filing Protocol (AFP) service, in some versions of Mac OS X Server or OS X (discussion).
Apple permanent version storage in Lion and Mountain Lion (discussion).
Apple System Information in Mountain Lion (discussion).
Google Drive.app 1.11 (discussion).
Last.fm Scrobbler AudioScrobbler.bundle 6.0.5
(discussion)
Peter Borg Apps AB Lingon, versions greater than 1.2 (discussion).
Shirt Pocket SuperDuper! 2.7.1 (v91) (discussion).
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